Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp49Q6P9L4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp49Q6P9L4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp49Q6P9L4 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm26047-201ENSMUST00000157308 113 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm12407-201ENSMUST00000180219 324 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm26047-202ENSMUST00000198840 115 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm6439-201ENSMUST00000199849 862 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.82□□□□□ -0.36
Usp49Q6P9L4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp49Q6P9L4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm11941-201ENSMUST00000119904 610 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm15329-201ENSMUST00000121408 155 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm6108-201ENSMUST00000208365 367 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp49Q6P9L4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms