Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Foxc2Q61850 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc2Q61850 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm22133-201ENSMUST00000102082 109 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm11439-201ENSMUST00000118598 409 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm14208-201ENSMUST00000119645 678 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm28071-201ENSMUST00000190355 478 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 AY036118-201ENSMUST00000200021 923 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.21□□□□□ -0.94
Foxc2Q61850 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Foxc2Q61850 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc2Q61850 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm14028-201ENSMUST00000117434 479 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm17827-201ENSMUST00000211825 742 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm18730-201ENSMUST00000218038 343 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm5455-201ENSMUST00000058710 715 ntBASIC9.2□□□□□ -0.94
Foxc2Q61850 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Foxc2Q61850 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc2Q61850 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms