Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm7467-201ENSMUST00000185173 652 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfaip3Q60769 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm11949-201ENSMUST00000117640 372 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm11500-201ENSMUST00000118237 601 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm12176-201ENSMUST00000121420 875 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm18367-201ENSMUST00000176139 600 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Tnfaip3Q60769 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Tnfaip3Q60769 Gm12029-201ENSMUST00000120073 832 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms