Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm13045-201ENSMUST00000119019 712 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Gm13263-201ENSMUST00000121271 838 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
ClpbQ60649 Mir3547-201ENSMUST00000175461 88 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm38117-201ENSMUST00000194653 939 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm9555-201ENSMUST00000200908 583 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
ClpbQ60649 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Lect2-202ENSMUST00000225183 823 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Ginm1-202ENSMUST00000065124 300 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
ClpbQ60649 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.04□□□□□ -0.64
ClpbQ60649 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.04□□□□□ -0.64
ClpbQ60649 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
ClpbQ60649 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.03□□□□□ -0.64
ClpbQ60649 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.03□□□□□ -0.64
ClpbQ60649 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm10051-201ENSMUST00000145209 414 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm4310-201ENSMUST00000177847 889 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Gm10774-201ENSMUST00000188689 204 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Erich3-203ENSMUST00000189969 3460 ntBASIC11.03□□□□□ -0.64
ClpbQ60649 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
ClpbQ60649 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
ClpbQ60649 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClpbQ60649 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms