Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps54Q5SPW0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm1848-201ENSMUST00000120711 789 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Mir7076-201ENSMUST00000183519 74 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm28388-201ENSMUST00000186262 437 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm8365-201ENSMUST00000197334 648 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm42657-201ENSMUST00000201746 211 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm5468-202ENSMUST00000227851 682 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps54Q5SPW0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.74□□□□□ -0.21
Vps54Q5SPW0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.74□□□□□ -0.21
Vps54Q5SPW0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps54Q5SPW0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps54Q5SPW0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms