Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm21811-201ENSMUST00000096485 930 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11439-201ENSMUST00000118598 409 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm18734-201ENSMUST00000172937 808 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm43966-201ENSMUST00000203301 612 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm6867-201ENSMUST00000219165 425 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav5d-4Q5R1F6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms