Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm9409-201ENSMUST00000197017 316 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm7589-201ENSMUST00000085631 534 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Map1b-203ENSMUST00000223725 2669 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm7781-201ENSMUST00000117258 788 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Spg11Q3UHA3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Spg11Q3UHA3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm23899-201ENSMUST00000158112 90 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm23479-201ENSMUST00000158876 122 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm9574-201ENSMUST00000173127 845 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm5845-201ENSMUST00000195812 796 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm3527-201ENSMUST00000198905 460 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm45258-201ENSMUST00000210042 853 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm8960-201ENSMUST00000219787 788 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms