Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm11663-201ENSMUST00000117888 290 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm8815-201ENSMUST00000173809 620 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm25890-201ENSMUST00000177643 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm22614-201ENSMUST00000178300 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm22042-201ENSMUST00000082989 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm26110-201ENSMUST00000083971 165 ntBASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm7003-201ENSMUST00000195089 312 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.03□□□□□ -0.48
Cul4aQ3TCH7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cul4aQ3TCH7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm14724-201ENSMUST00000118400 537 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm24749-201ENSMUST00000157838 343 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm28071-201ENSMUST00000190355 478 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm3961-201ENSMUST00000204425 994 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Gm45433-201ENSMUST00000209386 247 ntBASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cul4aQ3TCH7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms