Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC11.71□□□□□ -0.53
Col9a1Q05722 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC11.71□□□□□ -0.53
Col9a1Q05722 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 AC109214.2-201ENSMUST00000220089 358 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 AC123658.1-201ENSMUST00000228364 867 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col9a1Q05722 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm6478-201ENSMUST00000099450 742 ntBASIC11.71□□□□□ -0.53
Col9a1Q05722 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC11.71□□□□□ -0.53
Col9a1Q05722 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col9a1Q05722 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.71□□□□□ -0.54
Col9a1Q05722 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.71□□□□□ -0.54
Col9a1Q05722 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.71□□□□□ -0.54
Col9a1Q05722 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col9a1Q05722 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm11475-201ENSMUST00000118482 476 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Klra14-ps-201ENSMUST00000119532 802 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm8152-201ENSMUST00000120842 637 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm7150-201ENSMUST00000122032 981 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm14368-201ENSMUST00000145305 415 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm3150-201ENSMUST00000166418 204 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm38201-201ENSMUST00000192143 387 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm21049-201ENSMUST00000197078 987 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm43743-201ENSMUST00000197898 697 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm18894-201ENSMUST00000198794 694 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm44908-201ENSMUST00000208610 266 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC11.7□□□□□ -0.54
Col9a1Q05722 AC123738.1-201ENSMUST00000224796 773 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.7□□□□□ -0.54
Col9a1Q05722 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col9a1Q05722 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
Col9a1Q05722 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms