Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm37793-201ENSMUST00000195548 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm44126-201ENSMUST00000204831 514 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm9463-201ENSMUST00000206707 601 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm11667-201ENSMUST00000119828 486 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm9136-201ENSMUST00000193368 454 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.9□□□□□ -0.66
Nkx3-2P97503 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx3-2P97503 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx3-2P97503 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms