Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
SgcaP82350 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SgcaP82350 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.63□□□□□ -0.87
SgcaP82350 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SgcaP82350 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.63□□□□□ -0.87
SgcaP82350 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
SgcaP82350 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SgcaP82350 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
SgcaP82350 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.63□□□□□ -0.87
SgcaP82350 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SgcaP82350 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.63□□□□□ -0.87
SgcaP82350 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.62□□□□□ -0.87
SgcaP82350 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SgcaP82350 Gm12058-201ENSMUST00000118614 437 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.62□□□□□ -0.87
SgcaP82350 Gm6114-201ENSMUST00000182472 968 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.62□□□□□ -0.87
SgcaP82350 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.62□□□□□ -0.87
SgcaP82350 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Gm6091-201ENSMUST00000098307 165 ntBASIC9.62□□□□□ -0.87
SgcaP82350 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SgcaP82350 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SgcaP82350 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SgcaP82350 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcaP82350 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcaP82350 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SgcaP82350 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcaP82350 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcaP82350 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcaP82350 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Gm11591-201ENSMUST00000120063 702 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcaP82350 Gm7809-201ENSMUST00000153199 742 ntBASIC9.61□□□□□ -0.87
SgcaP82350 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.61□□□□□ -0.87
SgcaP82350 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms