Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
CiitaP79621 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.44□□□□□ -0.42
CiitaP79621 Gm13422-201ENSMUST00000118834 504 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Olfml3-204ENSMUST00000169286 874 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.44□□□□□ -0.42
CiitaP79621 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Mir6998-201ENSMUST00000183343 64 ntBASIC12.44□□□□□ -0.42
CiitaP79621 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Gm37284-201ENSMUST00000193607 539 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Gm43163-201ENSMUST00000196571 442 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.44□□□□□ -0.42
CiitaP79621 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CiitaP79621 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CiitaP79621 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CiitaP79621 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Gm8111-201ENSMUST00000117659 987 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm13182-201ENSMUST00000122241 312 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm24992-201ENSMUST00000157412 130 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm24398-201ENSMUST00000157870 109 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.43□□□□□ -0.42
CiitaP79621 Gm42518-201ENSMUST00000196277 938 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.43□□□□□ -0.42
CiitaP79621 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CiitaP79621 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.43□□□□□ -0.42
CiitaP79621 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
CiitaP79621 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.43□□□□□ -0.42
CiitaP79621 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CiitaP79621 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CiitaP79621 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CiitaP79621 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms