Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm8701-201ENSMUST00000169259 874 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Gm19246-201ENSMUST00000173599 255 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Gm7593-201ENSMUST00000187246 644 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Gm18776-201ENSMUST00000188833 654 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Gm19587-201ENSMUST00000191395 545 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Lmo4P61969 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Lmo4P61969 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Lmo4P61969 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lmo4P61969 Ntrk2-208ENSMUST00000225583 2719 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lmo4P61969 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.25□□□□□ -0.93
Lmo4P61969 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Lmo4P61969 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Lmo4P61969 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm11560-201ENSMUST00000117567 948 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm13351-201ENSMUST00000118087 414 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm9133-201ENSMUST00000118289 540 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm13284-201ENSMUST00000121020 547 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm17192-201ENSMUST00000169031 511 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm9369-201ENSMUST00000196009 733 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm43002-201ENSMUST00000200310 155 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.25□□□□□ -0.93
Lmo4P61969 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.25□□□□□ -0.93
Lmo4P61969 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Gm25201-201ENSMUST00000083093 170 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Mir483-201ENSMUST00000093631 73 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.25□□□□□ -0.93
Lmo4P61969 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.25□□□□□ -0.93
Lmo4P61969 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Lmo4P61969 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms