Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Nup43P59235 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Gm4726-201ENSMUST00000135604 736 ntBASIC10.85□□□□□ -0.67
Nup43P59235 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.85□□□□□ -0.67
Nup43P59235 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC10.85□□□□□ -0.67
Nup43P59235 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm6019-201ENSMUST00000148369 736 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Gm18367-201ENSMUST00000176139 600 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Gm7504-201ENSMUST00000201449 424 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Gm44100-201ENSMUST00000204329 436 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Nsd1-205ENSMUST00000224693 852 ntBASIC10.85□□□□□ -0.67
Nup43P59235 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.85□□□□□ -0.67
Nup43P59235 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nup43P59235 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.84□□□□□ -0.67
Nup43P59235 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nup43P59235 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gm15573-201ENSMUST00000119487 540 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm13408-201ENSMUST00000119822 798 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm13935-201ENSMUST00000121859 798 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nup43P59235 Gm7741-201ENSMUST00000181445 989 ntBASIC10.84□□□□□ -0.67
Nup43P59235 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gm8574-201ENSMUST00000203207 924 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm5996-201ENSMUST00000211110 718 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Gm8420-201ENSMUST00000097103 598 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nup43P59235 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nup43P59235 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms