Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Gm14071-201ENSMUST00000117817 509 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Gm11500-201ENSMUST00000118237 601 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Gm18367-201ENSMUST00000176139 600 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.47□□□□□ -0.57
Lim2P56563 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.47□□□□□ -0.57
Lim2P56563 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.47□□□□□ -0.57
Lim2P56563 Gm17831-201ENSMUST00000205579 900 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.47□□□□□ -0.57
Lim2P56563 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lim2P56563 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lim2P56563 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lim2P56563 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.47□□□□□ -0.57
Lim2P56563 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.46□□□□□ -0.57
Lim2P56563 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.46□□□□□ -0.57
Lim2P56563 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.46□□□□□ -0.57
Lim2P56563 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Lim2P56563 Gm11836-201ENSMUST00000121022 441 ntBASIC11.46□□□□□ -0.57
Lim2P56563 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.46□□□□□ -0.57
Lim2P56563 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lim2P56563 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.46□□□□□ -0.57
Lim2P56563 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Lim2P56563 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.46□□□□□ -0.57
Lim2P56563 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.46□□□□□ -0.57
Lim2P56563 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.46□□□□□ -0.57
Lim2P56563 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lim2P56563 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lim2P56563 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Lim2P56563 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Lim2P56563 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.46□□□□□ -0.58
Lim2P56563 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lim2P56563 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lim2P56563 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
Lim2P56563 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.45□□□□□ -0.58
Lim2P56563 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lim2P56563 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms