Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm7150-201ENSMUST00000122032 981 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Gm43184-201ENSMUST00000197247 542 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm45113-201ENSMUST00000207518 165 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rrp1P56183 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Rrp1P56183 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Mir877-201ENSMUST00000104738 85 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Gm15207-201ENSMUST00000119259 442 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.92□□□□□ -0.34
Rrp1P56183 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 AA914427-201ENSMUST00000193194 1166 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Gm37259-201ENSMUST00000193903 849 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.92□□□□□ -0.34
Rrp1P56183 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.92□□□□□ -0.34
Rrp1P56183 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rrp1P56183 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Rrp1P56183 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rrp1P56183 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.91□□□□□ -0.34
Rrp1P56183 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.91□□□□□ -0.34
Rrp1P56183 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms