Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Gm3551-201ENSMUST00000190750 664 ntBASIC10.75□□□□□ -0.69
Ptx3P48759 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.75□□□□□ -0.69
Ptx3P48759 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.75□□□□□ -0.69
Ptx3P48759 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.75□□□□□ -0.69
Ptx3P48759 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.75□□□□□ -0.69
Ptx3P48759 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.75□□□□□ -0.69
Ptx3P48759 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.75□□□□□ -0.69
Ptx3P48759 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ptx3P48759 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ptx3P48759 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Ptx3P48759 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm12516-201ENSMUST00000120819 385 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm9089-201ENSMUST00000122027 526 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.74□□□□□ -0.69
Ptx3P48759 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Mir8115-201ENSMUST00000184992 119 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm37299-201ENSMUST00000193951 826 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm37981-201ENSMUST00000194280 535 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm44980-201ENSMUST00000205826 314 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm44545-201ENSMUST00000208262 746 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm8285-201ENSMUST00000208293 759 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Snora73b-201ENSMUST00000083419 205 ntBASIC10.74□□□□□ -0.69
Ptx3P48759 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.74□□□□□ -0.69
Ptx3P48759 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ptx3P48759 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ptx3P48759 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ptx3P48759 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ptx3P48759 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms