Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rfx3P48381 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm17376-201ENSMUST00000166016 84 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 AY036118-201ENSMUST00000200021 923 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.38□□□□□ -0.75
Rfx3P48381 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Gm4157-201ENSMUST00000211647 679 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Gm6082-201ENSMUST00000215204 454 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.38□□□□□ -0.75
Rfx3P48381 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rfx3P48381 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Rfx3P48381 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.37□□□□□ -0.75
Rfx3P48381 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.37□□□□□ -0.75
Rfx3P48381 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rfx3P48381 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rfx3P48381 Gm29199-201ENSMUST00000187766 775 ntBASIC10.37□□□□□ -0.75
Rfx3P48381 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.37□□□□□ -0.75
Rfx3P48381 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.37□□□□□ -0.75
Rfx3P48381 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.37□□□□□ -0.75
Rfx3P48381 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.37□□□□□ -0.75
Rfx3P48381 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.37□□□□□ -0.75
Rfx3P48381 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rfx3P48381 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.37□□□□□ -0.75
Rfx3P48381 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms