Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx2-6P43688 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.89□□□□□ -0.67
Nkx2-6P43688 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx2-6P43688 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.88□□□□□ -0.67
Nkx2-6P43688 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm12247-201ENSMUST00000117585 670 ntBASIC10.88□□□□□ -0.67
Nkx2-6P43688 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm3793-201ENSMUST00000204973 672 ntBASIC10.88□□□□□ -0.67
Nkx2-6P43688 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.88□□□□□ -0.67
Nkx2-6P43688 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx2-6P43688 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm14219-201ENSMUST00000120414 288 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm15744-201ENSMUST00000161734 213 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm3619-201ENSMUST00000219947 775 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Gm23105-201ENSMUST00000083719 134 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms