Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tnfrsf1bP25119 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm12247-201ENSMUST00000117585 670 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm15352-201ENSMUST00000118696 270 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm18367-201ENSMUST00000176139 600 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm42997-202ENSMUST00000200321 985 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm2517-201ENSMUST00000215651 348 ntBASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf1bP25119 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm25318-201ENSMUST00000122554 314 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm9211-201ENSMUST00000182882 975 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Mir6546-201ENSMUST00000184460 62 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm7504-201ENSMUST00000201449 424 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Gm43852-201ENSMUST00000202098 917 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.65□□□□□ -0.7
Tnfrsf1bP25119 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms