Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
TP20293 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.85□□□□□ -0.67
TP20293 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.85□□□□□ -0.67
TP20293 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
TP20293 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.85□□□□□ -0.67
TP20293 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.85□□□□□ -0.67
TP20293 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
TP20293 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TP20293 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.84□□□□□ -0.67
TP20293 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TP20293 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TP20293 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.84□□□□□ -0.67
TP20293 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
TP20293 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TP20293 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TP20293 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
TP20293 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.84□□□□□ -0.67
TP20293 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.84□□□□□ -0.67
TP20293 Gm12217-201ENSMUST00000118858 696 ntBASIC10.84□□□□□ -0.67
TP20293 Gm12501-201ENSMUST00000119163 529 ntBASIC10.84□□□□□ -0.67
TP20293 Gm15207-201ENSMUST00000119259 442 ntBASIC10.84□□□□□ -0.67
TP20293 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.84□□□□□ -0.67
TP20293 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TP20293 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.84□□□□□ -0.67
TP20293 Gm18734-201ENSMUST00000172937 808 ntBASIC10.84□□□□□ -0.67
TP20293 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TP20293 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TP20293 Gm28686-201ENSMUST00000187404 609 ntBASIC10.84□□□□□ -0.67
TP20293 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.84□□□□□ -0.67
TP20293 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.84□□□□□ -0.67
TP20293 Gm19208-201ENSMUST00000213861 912 ntBASIC10.84□□□□□ -0.67
TP20293 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.84□□□□□ -0.67
TP20293 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.84□□□□□ -0.67
TP20293 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.84□□□□□ -0.67
TP20293 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TP20293 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
TP20293 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.83□□□□□ -0.67
TP20293 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
TP20293 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.83□□□□□ -0.68
TP20293 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.83□□□□□ -0.68
TP20293 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Gm15515-201ENSMUST00000117827 822 ntBASIC10.83□□□□□ -0.68
TP20293 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Gm11450-201ENSMUST00000121144 333 ntBASIC10.83□□□□□ -0.68
TP20293 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms