Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
ApoeP08226 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm22018-201ENSMUST00000104357 131 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
ApoeP08226 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm14660-201ENSMUST00000119809 575 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.86□□□□□ -0.67
ApoeP08226 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.86□□□□□ -0.67
ApoeP08226 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.86□□□□□ -0.67
ApoeP08226 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm5455-201ENSMUST00000058710 715 ntBASIC10.86□□□□□ -0.67
ApoeP08226 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.86□□□□□ -0.67
ApoeP08226 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ApoeP08226 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ApoeP08226 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.85□□□□□ -0.67
ApoeP08226 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm26286-201ENSMUST00000104166 134 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ApoeP08226 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm14071-201ENSMUST00000117817 509 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.85□□□□□ -0.67
ApoeP08226 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ApoeP08226 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ApoeP08226 Gm27514-201ENSMUST00000183692 110 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.85□□□□□ -0.67
ApoeP08226 Gm43133-201ENSMUST00000197472 463 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.85□□□□□ -0.67
ApoeP08226 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Gm8712-201ENSMUST00000221090 701 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Morn2-202ENSMUST00000227729 656 ntBASIC10.85□□□□□ -0.67
ApoeP08226 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.85□□□□□ -0.67
ApoeP08226 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ApoeP08226 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.85□□□□□ -0.67
ApoeP08226 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.85□□□□□ -0.67
ApoeP08226 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ApoeP08226 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ApoeP08226 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ApoeP08226 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms