Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.88□□□□□ -0.51
PrnpP04925 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
PrnpP04925 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.88□□□□□ -0.51
PrnpP04925 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrnpP04925 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.87□□□□□ -0.51
PrnpP04925 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
PrnpP04925 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm14165-201ENSMUST00000121456 952 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm15620-201ENSMUST00000122949 270 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.87□□□□□ -0.51
PrnpP04925 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.87□□□□□ -0.51
PrnpP04925 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm3329-201ENSMUST00000159873 556 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
PrnpP04925 Mir6941-201ENSMUST00000184711 59 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm5700-201ENSMUST00000191483 989 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm5870-201ENSMUST00000196461 282 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm42430-201ENSMUST00000197209 616 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
PrnpP04925 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm18035-201ENSMUST00000211962 589 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.87□□□□□ -0.51
PrnpP04925 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Id2-203ENSMUST00000222667 958 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Capsl-202ENSMUST00000226688 739 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
PrnpP04925 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.87□□□□□ -0.51
PrnpP04925 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PrnpP04925 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
PrnpP04925 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
PrnpP04925 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PrnpP04925 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PrnpP04925 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
PrnpP04925 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PrnpP04925 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
PrnpP04925 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Gm11996-201ENSMUST00000117538 915 ntBASIC11.86□□□□□ -0.51
PrnpP04925 Gm12943-201ENSMUST00000119616 210 ntBASIC11.86□□□□□ -0.51
PrnpP04925 Gm11354-201ENSMUST00000121974 422 ntBASIC11.86□□□□□ -0.51
PrnpP04925 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.86□□□□□ -0.51
PrnpP04925 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PrnpP04925 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.86□□□□□ -0.51
PrnpP04925 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.86□□□□□ -0.51
PrnpP04925 Gm17221-201ENSMUST00000163909 481 ntBASIC11.86□□□□□ -0.51
PrnpP04925 Gm17073-201ENSMUST00000168069 556 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms