Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.4□□□□□ -0.59
Pdlim1O70400 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pdlim1O70400 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm4294-201ENSMUST00000105169 614 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm11836-201ENSMUST00000121022 441 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm18753-201ENSMUST00000201000 566 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm8574-201ENSMUST00000203207 924 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pdlim1O70400 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pdlim1O70400 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.39□□□□□ -0.59
Pdlim1O70400 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pdlim1O70400 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm4726-201ENSMUST00000135604 736 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm6019-201ENSMUST00000148369 736 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm18367-201ENSMUST00000176139 600 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm4654-201ENSMUST00000183305 982 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm37981-201ENSMUST00000194280 535 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm7504-201ENSMUST00000201449 424 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Pdlim1O70400 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.38□□□□□ -0.59
Pdlim1O70400 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pdlim1O70400 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pdlim1O70400 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms