Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm8459-201ENSMUST00000162504 760 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm2383-201ENSMUST00000181461 807 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm5733-201ENSMUST00000190232 939 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm12579-201ENSMUST00000118040 783 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm8199-201ENSMUST00000121323 823 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm27552-201ENSMUST00000183351 62 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm27844-201ENSMUST00000183613 62 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Btrc-209ENSMUST00000224478 2194 ntBASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cldn9Q9Z0S7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cldn9Q9Z0S7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms