Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm9192-201ENSMUST00000183221 985 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm27552-201ENSMUST00000183351 62 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm27844-201ENSMUST00000183613 62 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm18827-201ENSMUST00000188341 790 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm28071-201ENSMUST00000190355 478 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sec61a2Q9JLR1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Gm28686-201ENSMUST00000187404 609 ntBASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Erich3-203ENSMUST00000189969 3460 ntBASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sec61a2Q9JLR1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm11960-201ENSMUST00000122068 925 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Mir7677-201ENSMUST00000184226 67 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm9797-202ENSMUST00000218003 294 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm18730-201ENSMUST00000218038 343 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms