Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.13□□□□□ -0.47
Nup50Q9JIH2 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup50Q9JIH2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm12579-201ENSMUST00000118040 783 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Mir1938-201ENSMUST00000158746 100 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm8100-201ENSMUST00000182906 988 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup50Q9JIH2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm15374-201ENSMUST00000119313 844 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm25881-201ENSMUST00000157783 103 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup50Q9JIH2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms