Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Gm6722-201ENSMUST00000221586 390 ntBASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf6Q9DBU5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm45856-201ENSMUST00000212752 416 ntBASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Ginm1-202ENSMUST00000065124 300 ntBASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf6Q9DBU5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm7666-201ENSMUST00000146631 819 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm43852-201ENSMUST00000202098 917 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm5996-201ENSMUST00000211110 718 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Rnf6Q9DBU5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms