Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Mir453-201ENSMUST00000104732 82 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm23694-201ENSMUST00000179335 110 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Mir6923-201ENSMUST00000184592 72 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm18204-201ENSMUST00000209835 793 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm39288-201ENSMUST00000210554 446 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm6390-201ENSMUST00000215034 589 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.28□□□□□ -0.6
Rrp8Q9DB85 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rrp8Q9DB85 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Gm9673-201ENSMUST00000119287 781 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Gm18776-201ENSMUST00000188833 654 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Gm45500-201ENSMUST00000211676 803 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Mt1-202ENSMUST00000211807 1085 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms