Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm27530-201ENSMUST00000184096 98 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm44008-201ENSMUST00000204345 412 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Gm10288-201ENSMUST00000084614 537 ntBASIC13.1□□□□□ -0.31
Trim11Q99PQ2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim11Q99PQ2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Mir877-201ENSMUST00000104738 85 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gm18734-201ENSMUST00000172937 808 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gm6108-201ENSMUST00000208365 367 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Gm18212-201ENSMUST00000211678 889 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim11Q99PQ2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim11Q99PQ2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim11Q99PQ2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim11Q99PQ2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim11Q99PQ2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim11Q99PQ2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms