Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Clrn1Q8K445 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm23251-201ENSMUST00000103773 110 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm8731-201ENSMUST00000118088 412 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Gm8420-201ENSMUST00000097103 598 ntBASIC10.83□□□□□ -0.68
Clrn1Q8K445 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Clrn1Q8K445 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clrn1Q8K445 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm8459-201ENSMUST00000162504 760 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm3150-201ENSMUST00000166418 204 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm10807-201ENSMUST00000177134 795 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm37466-201ENSMUST00000195692 652 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms