Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm22133-201ENSMUST00000102082 109 ntBASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm27572-201ENSMUST00000183702 255 ntBASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28aQ8CEI3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc28aQ8CEI3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc28aQ8CEI3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc28aQ8CEI3 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc28aQ8CEI3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm8062-201ENSMUST00000139696 444 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28aQ8CEI3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28aQ8CEI3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms