Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Alx1Q8C8B0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm12463-201ENSMUST00000118271 849 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm43163-201ENSMUST00000196571 442 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Alx1Q8C8B0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm11451-201ENSMUST00000118946 630 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm1848-201ENSMUST00000120711 789 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm28388-201ENSMUST00000186262 437 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm2875-201ENSMUST00000211333 360 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Alx1Q8C8B0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Alx1Q8C8B0 Gm6439-201ENSMUST00000199849 862 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms