Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm13117-201ENSMUST00000120894 691 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Mup-ps29-201ENSMUST00000122281 202 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm8492-201ENSMUST00000182375 987 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm3619-201ENSMUST00000219947 775 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp47Q8BY87 AC160410.1-201ENSMUST00000219298 1972 ntBASIC16.15■□□□□ 0.18
Usp47Q8BY87 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp47Q8BY87 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC16.14■□□□□ 0.18
Usp47Q8BY87 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp47Q8BY87 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm15197-201ENSMUST00000120526 478 ntBASIC16.14■□□□□ 0.17
Usp47Q8BY87 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp47Q8BY87 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp47Q8BY87 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm10169-201ENSMUST00000121822 348 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm6407-201ENSMUST00000176468 549 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm17798-201ENSMUST00000182282 1035 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm9139-201ENSMUST00000218817 700 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 AC102569.1-201ENSMUST00000221563 685 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 AC165154.1-201ENSMUST00000226661 340 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm5308-201ENSMUST00000196752 1354 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 AC174797.1-201ENSMUST00000224339 1649 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm12791-201ENSMUST00000120788 655 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm22846-201ENSMUST00000157706 270 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm25072-201ENSMUST00000175233 235 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.13■□□□□ 0.17
Usp47Q8BY87 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.13■□□□□ 0.17
Usp47Q8BY87 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp47Q8BY87 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp47Q8BY87 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp47Q8BY87 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp47Q8BY87 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp47Q8BY87 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Usp47Q8BY87 Gm44153-201ENSMUST00000204162 1580 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms