Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm22937-201ENSMUST00000103954 131 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm3828-201ENSMUST00000121817 257 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm43547-201ENSMUST00000197729 328 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm2448-201ENSMUST00000207080 559 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Gm9791-201ENSMUST00000060997 447 ntBASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx55Q6ZPL9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm11993-201ENSMUST00000121861 820 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm5529-201ENSMUST00000165691 891 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm19246-201ENSMUST00000173599 255 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm27956-201ENSMUST00000175604 260 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gm5178-201ENSMUST00000219380 898 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx55Q6ZPL9 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx55Q6ZPL9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms