Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm8162-201ENSMUST00000213951 665 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm29763-201ENSMUST00000205306 616 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup98Q6PFD9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm11996-201ENSMUST00000117538 915 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nup98Q6PFD9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm11957-201ENSMUST00000118304 779 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm5257-201ENSMUST00000121823 790 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm33080-201ENSMUST00000205429 172 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Gm45085-201ENSMUST00000209100 441 ntBASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup98Q6PFD9 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms