Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm9062-201ENSMUST00000117712 727 ntBASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm13809-201ENSMUST00000117921 597 ntBASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm43138-201ENSMUST00000199123 708 ntBASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Casc4Q6P2L7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm12165-201ENSMUST00000117047 342 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm10051-201ENSMUST00000145209 414 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm20426-201ENSMUST00000173657 440 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm38151-201ENSMUST00000195085 289 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm6867-201ENSMUST00000219165 425 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm8420-201ENSMUST00000097103 598 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Casc4Q6P2L7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Casc4Q6P2L7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms