Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ift88Q61371 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ift88Q61371 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Ift88Q61371 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm15207-201ENSMUST00000119259 442 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm26047-201ENSMUST00000157308 113 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm26047-202ENSMUST00000198840 115 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm13097-201ENSMUST00000210722 397 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Ift88Q61371 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.69□□□□□ -0.38
Ift88Q61371 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ift88Q61371 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Ift88Q61371 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ift88Q61371 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ift88Q61371 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.68□□□□□ -0.38
Ift88Q61371 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.68□□□□□ -0.38
Ift88Q61371 Gm27627-201ENSMUST00000183644 150 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Gm38266-201ENSMUST00000194931 421 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Gm38317-201ENSMUST00000195564 343 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 AY036118-201ENSMUST00000200021 923 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Gm44008-201ENSMUST00000204345 412 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Gm17812-201ENSMUST00000204935 318 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.68□□□□□ -0.38
Ift88Q61371 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ift88Q61371 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ift88Q61371 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms