Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc85aQ5SP85 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm24809-201ENSMUST00000175318 271 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm25998-201ENSMUST00000175397 53 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm6114-201ENSMUST00000182472 968 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm37284-201ENSMUST00000193607 539 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm6855-201ENSMUST00000206307 790 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm26670-202ENSMUST00000226862 340 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc85aQ5SP85 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm11957-201ENSMUST00000118304 779 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm14497-201ENSMUST00000119537 580 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm14441-201ENSMUST00000121960 540 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm23694-201ENSMUST00000179335 110 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc85aQ5SP85 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc85aQ5SP85 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc85aQ5SP85 Gm8111-201ENSMUST00000117659 987 ntBASIC12.77□□□□□ -0.37
Ccdc85aQ5SP85 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Ccdc85aQ5SP85 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc85aQ5SP85 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc85aQ5SP85 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms