Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm4925-202ENSMUST00000168843 1561 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm25735-201ENSMUST00000175164 215 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm19927-201ENSMUST00000185792 781 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm8615-201ENSMUST00000025307 771 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm15727-201ENSMUST00000122416 437 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm43103-201ENSMUST00000199021 802 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm44420-201ENSMUST00000203669 490 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm18466-201ENSMUST00000209147 499 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm29783-201ENSMUST00000219398 369 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm12947-201ENSMUST00000116114 420 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm28671-201ENSMUST00000187036 692 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm18030-201ENSMUST00000222163 731 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 AC124772.3-201ENSMUST00000222535 575 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 AC123698.1-201ENSMUST00000227090 402 ntBASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Spg11Q3UHA3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms