Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.44□□□□□ -0.42
Col9a2Q07643 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.44□□□□□ -0.42
Col9a2Q07643 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.44□□□□□ -0.42
Col9a2Q07643 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col9a2Q07643 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col9a2Q07643 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm14497-201ENSMUST00000119537 580 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm12628-201ENSMUST00000122193 382 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm3329-201ENSMUST00000159873 556 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm43778-201ENSMUST00000199438 199 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm43002-201ENSMUST00000200310 155 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Mt1-202ENSMUST00000211807 1085 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.43□□□□□ -0.42
Col9a2Q07643 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col9a2Q07643 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Col9a2Q07643 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.42□□□□□ -0.42
Col9a2Q07643 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Col9a2Q07643 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm15617-201ENSMUST00000118973 771 ntBASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm10169-201ENSMUST00000121822 348 ntBASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.42□□□□□ -0.42
Col9a2Q07643 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.42□□□□□ -0.42
Col9a2Q07643 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms