Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cacna1sQ02789 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Btrc-209ENSMUST00000224478 2194 ntBASIC14.24□□□□□ -0.13
Cacna1sQ02789 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.24□□□□□ -0.13
Cacna1sQ02789 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Gm14592-201ENSMUST00000117201 560 ntBASIC14.24□□□□□ -0.13
Cacna1sQ02789 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.24□□□□□ -0.13
Cacna1sQ02789 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC14.24□□□□□ -0.13
Cacna1sQ02789 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Klf10-203ENSMUST00000227920 2144 ntBASIC14.24□□□□□ -0.13
Cacna1sQ02789 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1sQ02789 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm23062-201ENSMUST00000102349 110 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm14231-201ENSMUST00000120090 592 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm6517-201ENSMUST00000121056 511 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm42859-201ENSMUST00000199572 193 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Fam220-ps-201ENSMUST00000116535 783 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm6276-201ENSMUST00000120159 579 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm13688-201ENSMUST00000121557 608 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm14699-201ENSMUST00000122340 228 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm25154-201ENSMUST00000157123 119 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm40414-201ENSMUST00000197608 481 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Gm3791-201ENSMUST00000220790 768 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 AC102327.1-201ENSMUST00000226389 742 ntBASIC14.23□□□□□ -0.13
Cacna1sQ02789 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1sQ02789 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.22□□□□□ -0.13
Cacna1sQ02789 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1sQ02789 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms