Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.47□□□□□ -0.41
CiitaP79621 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.47□□□□□ -0.41
CiitaP79621 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CiitaP79621 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CiitaP79621 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm13937-201ENSMUST00000121000 988 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm8531-201ENSMUST00000188319 893 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Gm17877-201ENSMUST00000192578 814 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.46□□□□□ -0.41
CiitaP79621 Gm23680-201ENSMUST00000083162 164 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Gm10263-201ENSMUST00000085163 300 ntBASIC12.46□□□□□ -0.41
CiitaP79621 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CiitaP79621 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.46□□□□□ -0.42
CiitaP79621 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CiitaP79621 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CiitaP79621 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CiitaP79621 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Gm23153-201ENSMUST00000175323 313 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm7600-201ENSMUST00000209657 785 ntBASIC12.45□□□□□ -0.42
CiitaP79621 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CiitaP79621 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.45□□□□□ -0.42
CiitaP79621 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CiitaP79621 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CiitaP79621 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms