Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.78□□□□□ -0.68
Six5P70178 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Gm14193-201ENSMUST00000105067 153 ntBASIC10.78□□□□□ -0.68
Six5P70178 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Six5P70178 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.78□□□□□ -0.68
Six5P70178 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.78□□□□□ -0.68
Six5P70178 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Gm37835-201ENSMUST00000193305 361 ntBASIC10.78□□□□□ -0.68
Six5P70178 Gm44008-201ENSMUST00000204345 412 ntBASIC10.78□□□□□ -0.68
Six5P70178 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Gm1821-202ENSMUST00000227415 750 ntBASIC10.78□□□□□ -0.68
Six5P70178 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Six5P70178 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Six5P70178 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Rgr-203ENSMUST00000225070 4704 ntBASIC10.78□□□□□ -0.68
Six5P70178 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Six5P70178 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Six5P70178 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.77□□□□□ -0.68
Six5P70178 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.77□□□□□ -0.68
Six5P70178 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.77□□□□□ -0.68
Six5P70178 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Six5P70178 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Six5P70178 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Six5P70178 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Six5P70178 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.77□□□□□ -0.68
Six5P70178 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.77□□□□□ -0.68
Six5P70178 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Six5P70178 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.77□□□□□ -0.68
Six5P70178 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.77□□□□□ -0.69
Six5P70178 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Six5P70178 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.77□□□□□ -0.69
Six5P70178 Gm22711-201ENSMUST00000116890 133 ntBASIC10.77□□□□□ -0.69
Six5P70178 Gm7150-201ENSMUST00000122032 981 ntBASIC10.77□□□□□ -0.69
Six5P70178 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.77□□□□□ -0.69
Six5P70178 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.77□□□□□ -0.69
Six5P70178 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.77□□□□□ -0.69
Six5P70178 Gm24844-201ENSMUST00000158679 127 ntBASIC10.77□□□□□ -0.69
Six5P70178 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.77□□□□□ -0.69
Six5P70178 Gm20495-201ENSMUST00000173902 235 ntBASIC10.77□□□□□ -0.69
Six5P70178 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Six5P70178 Gm10774-201ENSMUST00000188689 204 ntBASIC10.77□□□□□ -0.69
Six5P70178 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.77□□□□□ -0.69
Six5P70178 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.77□□□□□ -0.69
Six5P70178 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.77□□□□□ -0.69
Six5P70178 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.77□□□□□ -0.69
Six5P70178 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.77□□□□□ -0.69
Six5P70178 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.77□□□□□ -0.69
Six5P70178 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.77□□□□□ -0.69
Six5P70178 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Six5P70178 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms