Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PrkcbP68404 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PrkcbP68404 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PrkcbP68404 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PrkcbP68404 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PrkcbP68404 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
PrkcbP68404 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PrkcbP68404 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.44□□□□□ -0.42
PrkcbP68404 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm15374-201ENSMUST00000119313 844 ntBASIC12.43□□□□□ -0.42
PrkcbP68404 Gm25492-201ENSMUST00000157383 129 ntBASIC12.43□□□□□ -0.42
PrkcbP68404 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm45856-201ENSMUST00000212752 416 ntBASIC12.43□□□□□ -0.42
PrkcbP68404 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
PrkcbP68404 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 Rgr-203ENSMUST00000225070 4704 ntBASIC12.43□□□□□ -0.42
PrkcbP68404 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PrkcbP68404 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.43□□□□□ -0.42
PrkcbP68404 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PrkcbP68404 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm8111-201ENSMUST00000117659 987 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Gm23694-201ENSMUST00000179335 110 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm17877-201ENSMUST00000192578 814 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Gm42657-201ENSMUST00000201746 211 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Gm5468-202ENSMUST00000227851 682 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.42□□□□□ -0.42
PrkcbP68404 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.42□□□□□ -0.42
PrkcbP68404 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PrkcbP68404 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PrkcbP68404 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PrkcbP68404 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PrkcbP68404 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms