Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Lsm6P62313 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Lsm6P62313 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm27530-201ENSMUST00000184096 98 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 AU022133-201ENSMUST00000200601 873 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Lsm6P62313 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.11□□□□□ -0.79
Lsm6P62313 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Lsm6P62313 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Lsm6P62313 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lsm6P62313 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.1□□□□□ -0.79
Lsm6P62313 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Gm13461-201ENSMUST00000120980 662 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Gm14277-201ENSMUST00000121195 360 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lsm6P62313 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.1□□□□□ -0.79
Lsm6P62313 Gm2383-201ENSMUST00000181461 807 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.1□□□□□ -0.79
Lsm6P62313 Mir6420-201ENSMUST00000185032 102 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Gm29499-201ENSMUST00000189151 486 ntBASIC10.1□□□□□ -0.79
Lsm6P62313 Gm28329-201ENSMUST00000191208 689 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms