Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.16□□□□□ -0.46
Shmt1P50431 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.16□□□□□ -0.46
Shmt1P50431 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.16□□□□□ -0.46
Shmt1P50431 Gm37905-201ENSMUST00000195310 341 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Gm44329-201ENSMUST00000197469 112 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.16□□□□□ -0.46
Shmt1P50431 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.16□□□□□ -0.46
Shmt1P50431 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Shmt1P50431 Gm10254-201ENSMUST00000052888 867 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Gm5451-201ENSMUST00000080545 579 ntBASIC12.16□□□□□ -0.46
Shmt1P50431 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.16□□□□□ -0.46
Shmt1P50431 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Shmt1P50431 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Shmt1P50431 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Shmt1P50431 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shmt1P50431 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt1P50431 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt1P50431 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shmt1P50431 Gm4294-201ENSMUST00000105169 614 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt1P50431 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Gm3551-201ENSMUST00000190750 664 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Gm44008-201ENSMUST00000204345 412 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt1P50431 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Shmt1P50431 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.15□□□□□ -0.46
Shmt1P50431 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt1P50431 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt1P50431 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Shmt1P50431 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt1P50431 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt1P50431 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt1P50431 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt1P50431 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt1P50431 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Gm14942-201ENSMUST00000119642 336 ntBASIC12.14□□□□□ -0.47
Shmt1P50431 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.14□□□□□ -0.47
Shmt1P50431 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Gm25492-201ENSMUST00000157383 129 ntBASIC12.14□□□□□ -0.47
Shmt1P50431 Gm3329-201ENSMUST00000159873 556 ntBASIC12.14□□□□□ -0.47
Shmt1P50431 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.14□□□□□ -0.47
Shmt1P50431 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms