Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gm24255-201ENSMUST00000104481 128 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gm27627-201ENSMUST00000183644 150 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 AY036118-201ENSMUST00000200021 923 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gm17812-201ENSMUST00000204935 318 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.08□□□□□ -0.64
Tnfsf4P43488 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfsf4P43488 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm15207-201ENSMUST00000119259 442 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm14381-201ENSMUST00000122105 414 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm26047-201ENSMUST00000157308 113 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm38341-201ENSMUST00000195357 515 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm26047-202ENSMUST00000198840 115 ntBASIC11.07□□□□□ -0.64
Tnfsf4P43488 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfsf4P43488 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms