Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh2P43247 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.87□□□□□ -0.51
Msh2P43247 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Msh2P43247 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Msh2P43247 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Gm24749-201ENSMUST00000157838 343 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.86□□□□□ -0.51
Msh2P43247 Gm6114-201ENSMUST00000182472 968 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Gm18212-201ENSMUST00000211678 889 ntBASIC11.86□□□□□ -0.51
Msh2P43247 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Msh2P43247 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Msh2P43247 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh2P43247 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh2P43247 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.86□□□□□ -0.51
Msh2P43247 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh2P43247 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Msh2P43247 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.85□□□□□ -0.51
Msh2P43247 Gm5419-201ENSMUST00000119301 527 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Gm11960-201ENSMUST00000122068 925 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Gm5616-201ENSMUST00000165252 384 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Gm8741-201ENSMUST00000174736 384 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Gm2260-201ENSMUST00000184965 657 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 AY036118-201ENSMUST00000200021 923 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Gm4607-201ENSMUST00000206649 577 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Gm8385-201ENSMUST00000058999 643 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Msh2P43247 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh2P43247 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.85□□□□□ -0.51
Msh2P43247 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh2P43247 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Msh2P43247 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.84□□□□□ -0.51
Msh2P43247 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.84□□□□□ -0.51
Msh2P43247 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh2P43247 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh2P43247 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh2P43247 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Msh2P43247 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msh2P43247 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msh2P43247 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msh2P43247 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msh2P43247 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms