Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17221-201ENSMUST00000163909 481 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm17073-201ENSMUST00000168069 556 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm25677-201ENSMUST00000174983 72 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm26976-201ENSMUST00000182929 908 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm27390-201ENSMUST00000184516 176 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm34379-201ENSMUST00000195036 290 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm6855-201ENSMUST00000206307 790 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm45856-201ENSMUST00000212752 416 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Gm8255-201ENSMUST00000218693 305 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.93□□□□□ -0.66
Cdx2P43241 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cdx2P43241 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdx2P43241 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdx2P43241 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdx2P43241 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm22594-201ENSMUST00000104251 130 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Cdx2P43241 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23400-201ENSMUST00000174994 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm26463-201ENSMUST00000175065 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm24332-201ENSMUST00000175102 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25959-201ENSMUST00000175112 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm22475-201ENSMUST00000175169 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm22903-201ENSMUST00000175193 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25070-201ENSMUST00000175237 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm24159-201ENSMUST00000175264 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25299-201ENSMUST00000175283 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23798-201ENSMUST00000175560 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23802-201ENSMUST00000175565 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25708-201ENSMUST00000177687 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm24370-201ENSMUST00000178007 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23049-201ENSMUST00000178068 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm28019-201ENSMUST00000178138 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25571-201ENSMUST00000178322 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25355-201ENSMUST00000178456 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm24975-201ENSMUST00000178492 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23189-201ENSMUST00000178954 102 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm25100-201ENSMUST00000179750 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm23064-201ENSMUST00000179866 101 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm40879-201ENSMUST00000220759 612 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Capsl-202ENSMUST00000226688 739 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cdx2P43241 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.92□□□□□ -0.66
Cdx2P43241 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdx2P43241 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdx2P43241 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms